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1. LoRA-DR-suite LoRA-DR-suite Public

   Code for the paper "LoRA-DR-suite: adapted embeddings predict intrinsic and soft disorder from protein sequences"

   Python

2. mulan mulan Public

   Code for the paper "MuLAN: Mutation-driven Light Attention Networks for investigating protein-protein interactions from sequences"

   Python

3. gemme-utils gemme-utils Public

   A collection of scripts for GEMME/ESCOTT softwares, as part of the paper "Unlocking protein evolution insights: efficient and interpretable mutational effect predictions with GEMME"

   Python

4. AM-distil AM-distil Public

   Distillation from AlphaMissense scores on human proteins to enable fast and improved Deep Mutational scanning predictions from pLMs embeddings

   Python

5. PoET-S PoET-S Public

   Forked from OpenProteinAI/PoET

   PoET-S: a Flamingo-inspired adapted version of PoET model for protein sequence generation with structure conditioning

   Python

6. ML-protein-classification ML-protein-classification Public

   Analysis and classification of natural and artificial proteins with different machine learning methods

   Jupyter Notebook 1